Repo structure

• The analysis directory contains scripts that perform various analysis of pipeline output.

• The bin directory contains executable scripts that run the pipeline and perform other maintenance tasks.

• The cmake directory contains some CMake modules for the build process.

• The config directory contains the specification for the config file that controls the options for running the pipeline.

• The docs directory contains some documentation.

• The gen directory contains routines that are generally useful for MLSO instrument pipelines.

• The lib directory contains more general library routines not written by MLSO.

• The regression directory contains code specifically for the regression tests.

• The resource directory contains non-source code files used by the pipeline: distortion correction coefficients, demodulation coefficients, the epochs file, information about the wave regions, database table specifications, color tables, hot pixel locations, file validation specifications, and logo images.

• The scripts directory contains scripts that are run to maintain the repo: create the documentation, run the unit tests, find SSW dependencies, etc.

• The src directory contains all the UCoMP-specific pipeline code.

• The ssw directory contains SolarSoft routines needed for the pipeline. Only the routines necessary for the pipeline are included and are not automatically updated so that the pipeline does not break if SolarSoft is updated.

• The unit directory contains the unit tests.